fixing accidentally copying issue

main
Brett 2024-11-22 10:41:54 -05:00
parent c83208419d
commit f5c79b5bb4
3034 changed files with 1736009 additions and 463 deletions

View File

@ -1,244 +1,483 @@
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cmake_minimum_required(VERSION 3.25) cmake_minimum_required(VERSION 3.25)
project(COSC-4P80-Assignment-3 VERSION 0.0.28) project(COSC-4P80-Assignment-3 VERSION 0.0.29)
include(FetchContent) include(FetchContent)
option(ENABLE_ADDRSAN "Enable the address sanitizer" OFF) option(ENABLE_ADDRSAN "Enable the address sanitizer" OFF)

View File

@ -25,65 +25,79 @@
namespace assign3 namespace assign3
{ {
class array_t class array_t
{ {
public: public:
explicit array_t(blt::size_t dimensions, blt::size_t width, blt::size_t height, shape_t shape): explicit array_t(blt::size_t dimensions, blt::size_t width, blt::size_t height, shape_t shape):
width(static_cast<blt::i64>(width)), height(static_cast<blt::i64>(height)) width(static_cast<blt::i64>(width)), height(static_cast<blt::i64>(height))
{
switch (shape)
{ {
switch (shape) case shape_t::GRID:
{ case shape_t::GRID_WRAP:
case shape_t::GRID: for (blt::size_t j = 0; j < height; j++)
case shape_t::GRID_WRAP: for (blt::size_t i = 0; i < width; i++)
for (blt::size_t j = 0; j < height; j++) map.emplace_back(dimensions, i, j);
for (blt::size_t i = 0; i < width; i++) break;
map.emplace_back(dimensions, i, j); case shape_t::GRID_OFFSET:
break; case shape_t::GRID_OFFSET_WRAP:
case shape_t::GRID_OFFSET: for (blt::size_t j = 0; j < height; j++)
case shape_t::GRID_OFFSET_WRAP: for (blt::size_t i = 0; i < width; i++)
for (blt::size_t j = 0; j < height; j++) map.emplace_back(dimensions, (j % 2 == 0 ? static_cast<Scalar>(i) : static_cast<Scalar>(i) + 0.5f), j);
for (blt::size_t i = 0; i < width; i++) // static_cast<Scalar>(static_cast<double>(j) * (std::sqrt(3) / 2.0))
map.emplace_back(dimensions, (j % 2 == 0 ? static_cast<Scalar>(i) : static_cast<Scalar>(i) + 0.5f), j); break;
// static_cast<Scalar>(static_cast<double>(j) * (std::sqrt(3) / 2.0))
break;
}
} }
}
[[nodiscard]] blt::vec2ul from_index(blt::size_t index) const array_t(const array_t&) = delete;
{ array_t& operator=(const array_t&) = delete;
return {index % width, index / width}; array_t(array_t&&) = default;
} array_t& operator=(array_t&&) = default;
neuron_t& get(blt::size_t x, blt::size_t y) [[nodiscard]] blt::vec2ul from_index(blt::size_t index) const
{ return map[y * width + x]; } {
return {index % width, index / width};
}
[[nodiscard]] const neuron_t& get(blt::size_t x, blt::size_t y) const neuron_t& get(blt::size_t x, blt::size_t y)
{ return map[y * width + x]; } {
return map[y * width + x];
}
[[nodiscard]] blt::size_t get_width() const [[nodiscard]] const neuron_t& get(blt::size_t x, blt::size_t y) const
{ return width; } {
return map[y * width + x];
}
[[nodiscard]] blt::size_t get_height() const [[nodiscard]] blt::size_t get_width() const
{ return height; } {
return width;
}
[[nodiscard]] std::vector<neuron_t>& get_map() [[nodiscard]] blt::size_t get_height() const
{ return map; } {
return height;
}
[[nodiscard]] const std::vector<neuron_t>& get_map() const [[nodiscard]] std::vector<neuron_t>& get_map()
{ return map; } {
return map;
}
private: [[nodiscard]] const std::vector<neuron_t>& get_map() const
[[nodiscard]] blt::i64 wrap_width(blt::i64 x) const; {
return map;
}
[[nodiscard]] blt::i64 wrap_height(blt::i64 y) const; private:
[[nodiscard]] blt::i64 wrap_width(blt::i64 x) const;
private: [[nodiscard]] blt::i64 wrap_height(blt::i64 y) const;
blt::i64 width, height;
std::vector<neuron_t> map; private:
blt::i64 width, height;
std::vector<neuron_t> map;
}; };
} }
#endif //COSC_4P80_ASSIGNMENT_3_ARRAY_H #endif //COSC_4P80_ASSIGNMENT_3_ARRAY_H

View File

@ -29,47 +29,62 @@ namespace assign3
{ {
class neuron_t class neuron_t
{ {
public: public:
explicit neuron_t(blt::size_t dimensions, Scalar x, Scalar y): x_pos(x), y_pos(y) explicit neuron_t(blt::size_t dimensions, Scalar x, Scalar y): x_pos(x), y_pos(y)
{ {
data.resize(dimensions); data.resize(dimensions);
} }
neuron_t& randomize(blt::size_t seed, init_t init, bool normalize, const data_file_t& file); neuron_t(const neuron_t&) = delete;
neuron_t& operator=(const neuron_t&) = delete;
neuron_t& update(const std::vector<Scalar>& new_data, Scalar dist, Scalar eta); neuron_t(neuron_t&&) = default;
neuron_t& operator=(neuron_t&&) = default;
static Scalar distance(distance_function_t* dist_func, const neuron_t& n1, const neuron_t& n2); neuron_t& randomize(blt::size_t seed, init_t init, bool normalize, const data_file_t& file);
[[nodiscard]] Scalar dist(const std::vector<Scalar>& X) const; neuron_t& update(const std::vector<Scalar>& new_data, Scalar dist, Scalar eta);
neuron_t& set_activation(Scalar act) static Scalar distance(distance_function_t* dist_func, const neuron_t& n1, const neuron_t& n2);
{
activation = act;
return *this;
}
void activate(Scalar act) [[nodiscard]] Scalar dist(const std::vector<Scalar>& X) const;
{ activation += act; }
[[nodiscard]] const std::vector<Scalar>& get_data() const neuron_t& set_activation(Scalar act)
{ return data; } {
activation = act;
return *this;
}
[[nodiscard]] Scalar get_x() const void activate(Scalar act)
{ return x_pos; } {
activation += act;
}
[[nodiscard]] Scalar get_y() const [[nodiscard]] const std::vector<Scalar>& get_data() const
{ return y_pos; } {
return data;
}
[[nodiscard]] Scalar get_activation() const [[nodiscard]] Scalar get_x() const
{ return activation; } {
return x_pos;
}
private: [[nodiscard]] Scalar get_y() const
Scalar x_pos, y_pos; {
Scalar activation = 0; return y_pos;
std::vector<Scalar> data; }
[[nodiscard]] Scalar get_activation() const
{
return activation;
}
private:
Scalar x_pos, y_pos;
Scalar activation = 0;
std::vector<Scalar> data;
}; };
} }
#endif //COSC_4P80_ASSIGNMENT_3_NEURON_H #endif //COSC_4P80_ASSIGNMENT_3_NEURON_H

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namespace assign3 namespace assign3
{ {
class som_t class som_t
{ {
public: public:
som_t(const data_file_t& file, blt::size_t width, blt::size_t height, blt::size_t max_epochs, distance_function_t* dist_func, som_t(const data_file_t& file, blt::size_t width, blt::size_t height, blt::size_t max_epochs, distance_function_t* dist_func,
topology_function_t* topology_function, shape_t shape, init_t init, bool normalize); topology_function_t* topology_function, shape_t shape, init_t init, bool normalize);
blt::size_t get_closest_neuron(const std::vector<Scalar>& data); som_t(const som_t&) = delete;
som_t& operator=(const som_t&) = delete;
som_t(som_t&&) = default;
som_t& operator=(som_t&&) = default;
Scalar find_closest_neighbour_distance(blt::size_t v0); blt::size_t get_closest_neuron(const std::vector<Scalar>& data);
void train_epoch(Scalar initial_learn_rate); Scalar find_closest_neighbour_distance(blt::size_t v0);
blt::vec2 get_topological_position(const std::vector<Scalar>& data); void train_epoch(Scalar initial_learn_rate);
Scalar topological_error(); blt::vec2 get_topological_position(const std::vector<Scalar>& data);
Scalar quantization_error(); Scalar topological_error();
void compute_errors(); Scalar quantization_error();
void compute_neuron_activations(Scalar distance = 2, Scalar activation = 0.5); void compute_errors();
void write_activations(std::ostream& out); void compute_neuron_activations(Scalar distance = 2, Scalar activation = 0.5);
void write_topology_errors(std::ostream& out); void write_activations(std::ostream& out);
void write_quantization_errors(std::ostream& out); void write_topology_errors(std::ostream& out);
void write_all_errors(std::ostream& out); void write_quantization_errors(std::ostream& out);
[[nodiscard]] const array_t& get_array() const void write_all_errors(std::ostream& out);
{ return array; }
[[nodiscard]] blt::size_t get_current_epoch() const [[nodiscard]] const array_t& get_array() const
{ return current_epoch; } {
return array;
}
[[nodiscard]] blt::size_t get_max_epochs() const [[nodiscard]] blt::size_t get_current_epoch() const
{ return max_epochs; } {
return current_epoch;
}
[[nodiscard]] const std::vector<Scalar>& get_topological_errors() const [[nodiscard]] blt::size_t get_max_epochs() const
{ return topological_errors; } {
return max_epochs;
}
[[nodiscard]] const std::vector<Scalar>& get_quantization_errors() const [[nodiscard]] const std::vector<Scalar>& get_topological_errors() const
{ return quantization_errors; } {
return topological_errors;
}
private: [[nodiscard]] const std::vector<Scalar>& get_quantization_errors() const
array_t array; {
data_file_t file; return quantization_errors;
blt::size_t current_epoch = 0; }
blt::size_t max_epochs;
distance_function_t* dist_func;
topology_function_t* topology_function;
// normalized value for which below this will be considered neural private:
float quantization_distance = 0.25; array_t array;
data_file_t file;
blt::size_t current_epoch = 0;
blt::size_t max_epochs;
distance_function_t* dist_func;
topology_function_t* topology_function;
std::vector<Scalar> topological_errors; // normalized value for which below this will be considered neural
std::vector<Scalar> quantization_errors; float quantization_distance = 0.25;
std::vector<Scalar> topological_errors;
std::vector<Scalar> quantization_errors;
}; };
} }
#endif //COSC_4P80_ASSIGNMENT_3_SOM_H #endif //COSC_4P80_ASSIGNMENT_3_SOM_H

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