/* * Open BEAGLE * Copyright (C) 2001-2007 by Christian Gagne and Marc Parizeau * * This library is free software; you can redistribute it and/or * modify it under the terms of the GNU Lesser General Public * License as published by the Free Software Foundation; either * version 2.1 of the License, or (at your option) any later version. * * This library is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with this library; if not, write to the Free Software * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA * * Contact: * Laboratoire de Vision et Systemes Numeriques * Departement de genie electrique et de genie informatique * Universite Laval, Quebec, Canada, G1K 7P4 * http://vision.gel.ulaval.ca * */ /*! * \file beagle/GA/src/MutationUniformIntVecOp.cpp * \brief Source code of class GA::MutationUniformIntVecOp. * \author Christian Gagne * \author Marc Parizeau * $Revision: 1.4.2.1 $ * $Date: 2007/05/09 01:51:03 $ */ #include "beagle/GA.hpp" #include #include using namespace Beagle; /*! * \brief Construct an integer vector GA uniform mutation operator. * \param inMutationPbName Mutation probability parameter name used in register. * \param inIntMutatePbName Mutation integer probability parameter name used in register. * \param inName Name of the operator. */ GA::MutationUniformIntVecOp::MutationUniformIntVecOp(Beagle::string inMutationPbName, Beagle::string inIntMutatePbName, Beagle::string inName) : Beagle::MutationOp(inMutationPbName, inName), mIntMutatePbName(inIntMutatePbName) { } /*! * \brief Initialize the integer vector GA uniform mutation operator. * \param ioSystem System of the evolution. */ void GA::MutationUniformIntVecOp::initialize(System& ioSystem) { Beagle_StackTraceBeginM(); Beagle::MutationOp::initialize(ioSystem); if(ioSystem.getRegister().isRegistered(mMutationPbName)) { ioSystem.getRegister().deleteEntry(mMutationPbName); } if(ioSystem.getRegister().isRegistered(mMutationPbName)) { mMutationProba = castHandleT(ioSystem.getRegister()[mMutationPbName]); } else { mMutationProba = new Float(float(0.1)); Register::Description lProbaDescription( "Individual unif. mutation prob.", "Float", "0.1", "Integer vector uniform mutation probability for each GA individual." ); ioSystem.getRegister().addEntry(mMutationPbName, mMutationProba, lProbaDescription); } if(ioSystem.getRegister().isRegistered(mIntMutatePbName)) { mIntMutateProba = castHandleT(ioSystem.getRegister()[mIntMutatePbName]); } else { mIntMutateProba = new Float(float(0.1)); Register::Description lIntDescription( "Int unif. mutation probability", "Float", "0.1", "Probability for each integer to be modified by mutation, when an individual is mutated." ); ioSystem.getRegister().addEntry(mIntMutatePbName, mIntMutateProba, lIntDescription); } if(ioSystem.getRegister().isRegistered("ga.int.maxvalue")) { mMaxValue = castHandleT(ioSystem.getRegister()["ga.int.maxvalue"]); } else { mMaxValue = new IntArray(1,INT_MAX); std::ostringstream lOSS; lOSS << "Maximum values assigned to vector's integers. "; lOSS << "Value can be a scalar, which limit the value for all integers "; lOSS << "vector parameters, or a vector which limit the value for the parameters "; lOSS << "individually. If the maximum value is smaller than the "; lOSS << "integer vector size, the limit used for the last values of the integer vector "; lOSS << "is equal to the last value of the maximum value vector."; Register::Description lDescription( "Maximum integer values", "IntArray", int2str(INT_MAX), lOSS.str().c_str() ); ioSystem.getRegister().addEntry("ga.int.maxvalue", mMaxValue, lDescription); } if(ioSystem.getRegister().isRegistered("ga.int.minvalue")) { mMinValue = castHandleT(ioSystem.getRegister()["ga.int.minvalue"]); } else { mMinValue = new IntArray(1,INT_MIN); std::ostringstream lOSS; lOSS << "Minimum values assigned to vector's integers. "; lOSS << "Value can be a scalar, which limit the value for all integer "; lOSS << "vector parameters, or a vector which limit the value for the parameters "; lOSS << "individually. If the minimum value is smaller than the "; lOSS << "integer vector size, the limit used for the last values of the integer vector "; lOSS << "is equal to the last value of the minimum value vector."; Register::Description lDescription( "Minimum integer values", "IntArray", int2str(INT_MIN), lOSS.str().c_str() ); ioSystem.getRegister().addEntry("ga.int.minvalue", mMinValue, lDescription); } Beagle_StackTraceEndM("void GA::MutationUniformIntVecOp::initialize(System& ioSystem)"); } /*! * \brief Uniformly mutate an integer vector GA individual. * \param ioIndividual GA individual to mutate. * \param ioContext Context of the evolution. * \return True if the individual is effectively mutated, false if not. */ bool GA::MutationUniformIntVecOp::mutate(Beagle::Individual& ioIndividual, Context& ioContext) { Beagle_StackTraceBeginM(); Beagle_ValidateParameterM(mIntMutateProba->getWrappedValue()>=0.0, mIntMutatePbName, "<0"); bool lMutated = false; Beagle_LogVerboseM( ioContext.getSystem().getLogger(), "mutation", "Beagle::GA::MutationUniformIntVecOp", string("Integer uniform mutation probability is: ")+ dbl2str(mIntMutateProba->getWrappedValue()) ); for(unsigned int i=0; i(ioIndividual[i]); Beagle_LogVerboseM( ioContext.getSystem().getLogger(), "mutation", "Beagle::GA::MutationUniformIntVecOp", string("Uniformly mutating the ")+uint2ordinal(i+1)+" integer vector" ); Beagle_LogDebugM( ioContext.getSystem().getLogger(), "mutation", "Beagle::GA::MutationUniformIntVecOp", string("The integer vector before GA uniform mutation: ")+lIV->serialize() ); for(unsigned int j=0; jsize(); j++) { double lRolledPb = ioContext.getSystem().getRandomizer().rollUniform(); if(lRolledPb <= mIntMutateProba->getWrappedValue()) { const int lMaxVal = jsize() ? (*mMaxValue)[j] : mMaxValue->back(); const int lMinVal = jsize() ? (*mMinValue)[j] : mMinValue->back(); (*lIV)[j] = ioContext.getSystem().getRandomizer().rollInteger(lMinVal, lMaxVal); lMutated = true; } } if(lMutated) { Beagle_LogVerboseM( ioContext.getSystem().getLogger(), "mutation", "Beagle::GA::MutationUniformIntVecOp", string("The integer vector has been uniformly mutated") ); Beagle_LogDebugM( ioContext.getSystem().getLogger(), "mutation", "Beagle::GA::MutationUniformIntVecOp", string("The integer vector after GA uniform mutation: ")+lIV->serialize() ); } else { Beagle_LogVerboseM( ioContext.getSystem().getLogger(), "mutation", "Beagle::GA::MutationUniformIntVecOp", string("The integer vector has not been mutated") ); } } return lMutated; Beagle_StackTraceEndM("bool GA::MutationUniformIntVecOp::mutate(Beagle::Individual& ioIndividual, Context& ioContext)"); } /*! * \brief Read a uniform mutation operator from XML subtree. * \param inIter XML iterator to use to read mutation operator. * \param inOpMap Operator map to use to read mutation operator. */ void GA::MutationUniformIntVecOp::readWithMap(PACC::XML::ConstIterator inIter, OperatorMap& inOpMap) { Beagle_StackTraceBeginM(); if((inIter->getType()!=PACC::XML::eData) || (inIter->getValue()!=getName().c_str())) { std::ostringstream lOSS; lOSS << "tag <" << getName() << "> expected!" << std::flush; throw Beagle_IOExceptionNodeM(*inIter, lOSS.str().c_str()); } string lMutationPbReadName = inIter->getAttribute("mutationpb").c_str(); if(lMutationPbReadName.empty() == false) mMutationPbName = lMutationPbReadName; string lIntMutatePbReadName = inIter->getAttribute("mutintpb").c_str(); if(lIntMutatePbReadName.empty() == false) mIntMutatePbName = lIntMutatePbReadName; Beagle_StackTraceEndM("void GA::MutationUniformIntVecOp::readWithMap(PACC::XML::ConstIterator inIter, OperatorMap& inOpMap)"); } /*! * \brief Write uniform mutation operator into XML streamer. * \param ioStreamer XML streamer to write mutation operator into. * \param inIndent Whether XML output should be indented. */ void GA::MutationUniformIntVecOp::writeContent(PACC::XML::Streamer& ioStreamer, bool inIndent) const { Beagle_StackTraceBeginM(); Beagle::MutationOp::writeContent(ioStreamer, inIndent); ioStreamer.insertAttribute("mutintpb", mIntMutatePbName); Beagle_StackTraceEndM("void GA::MutationUniformIntVecOp::writeContent(PACC::XML::Streamer& ioStreamer, bool inIndent) const"); }